Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AC012317.2-201ENST00000623305 2251 ntBASIC16.49■□□□□ 0.23
TRIM2Q9C040 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM2Q9C040 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM2Q9C040 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 KRT89P-201ENST00000620027 1478 ntBASIC16.48■□□□□ 0.23
TRIM2Q9C040 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 LINC00167-201ENST00000530583 1419 ntBASIC16.48■□□□□ 0.23
TRIM2Q9C040 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.48■□□□□ 0.23
TRIM2Q9C040 RASA4DP-201ENST00000460726 1199 ntBASIC16.48■□□□□ 0.23
TRIM2Q9C040 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 AC024563.2-201ENST00000603282 481 ntBASIC16.48■□□□□ 0.23
TRIM2Q9C040 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM2Q9C040 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM2Q9C040 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC063952.2-201ENST00000498792 1227 ntBASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC087388.1-201ENST00000571370 1112 ntBASIC16.47■□□□□ 0.23
TRIM2Q9C040 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC139887.4-201ENST00000607877 719 ntBASIC16.47■□□□□ 0.23
TRIM2Q9C040 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 LINC00602-201ENST00000629776 2065 ntBASIC16.47■□□□□ 0.23
TRIM2Q9C040 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM2Q9C040 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM2Q9C040 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms