Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 HLA-J-201ENST00000462773 1622 ntBASIC18.6■□□□□ 0.57
LRRC3Q9BY71 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 AC098831.1-202ENST00000438821 336 ntBASIC18.59■□□□□ 0.57
LRRC3Q9BY71 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC3Q9BY71 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC3Q9BY71 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRRC3Q9BY71 ZNF259P1-201ENST00000407656 1365 ntBASIC18.58■□□□□ 0.57
LRRC3Q9BY71 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 AC092910.1-201ENST00000482027 1129 ntBASIC18.58■□□□□ 0.56
LRRC3Q9BY71 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 AC034105.1-201ENST00000563488 319 ntBASIC18.58■□□□□ 0.56
LRRC3Q9BY71 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC3Q9BY71 AC104109.2-201ENST00000602919 1418 ntBASIC18.57■□□□□ 0.56
LRRC3Q9BY71 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 COX5BP2-201ENST00000392354 334 ntBASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 PGAM5P1-201ENST00000518923 814 ntBASIC18.57■□□□□ 0.56
LRRC3Q9BY71 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 AC139530.3-201ENST00000620344 690 ntBASIC18.57■□□□□ 0.56
LRRC3Q9BY71 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC3Q9BY71 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms