Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AP000525.1-201ENST00000608286 694 ntBASIC20.37■□□□□ 0.85
ARID3AQ99856 DGCR10-201ENST00000609839 495 ntBASIC20.37■□□□□ 0.85
ARID3AQ99856 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.37■□□□□ 0.85
ARID3AQ99856 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 AC096733.2-201ENST00000609937 1394 ntBASIC20.36■□□□□ 0.85
ARID3AQ99856 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 AL512353.2-201ENST00000448759 1962 ntBASIC20.36■□□□□ 0.85
ARID3AQ99856 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 AL390955.1-201ENST00000428694 934 ntBASIC20.36■□□□□ 0.85
ARID3AQ99856 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.36■□□□□ 0.85
ARID3AQ99856 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC20.36■□□□□ 0.85
ARID3AQ99856 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.36■□□□□ 0.85
ARID3AQ99856 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ARID3AQ99856 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARID3AQ99856 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 AC108860.2-201ENST00000562760 2183 ntBASIC20.35■□□□□ 0.85
ARID3AQ99856 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.35■□□□□ 0.85
ARID3AQ99856 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ARID3AQ99856 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.35■□□□□ 0.85
ARID3AQ99856 MFAP1P1-201ENST00000442257 1255 ntBASIC20.35■□□□□ 0.85
ARID3AQ99856 AC097488.1-201ENST00000507834 756 ntBASIC20.35■□□□□ 0.85
ARID3AQ99856 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.35■□□□□ 0.85
ARID3AQ99856 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
ARID3AQ99856 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.35■□□□□ 0.85
ARID3AQ99856 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.35■□□□□ 0.85
ARID3AQ99856 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.35■□□□□ 0.85
ARID3AQ99856 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARID3AQ99856 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.34■□□□□ 0.85
ARID3AQ99856 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARID3AQ99856 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.34■□□□□ 0.85
ARID3AQ99856 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.34■□□□□ 0.85
ARID3AQ99856 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms