Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 AC004870.1-201ENST00000315132 882 ntBASIC18.72■□□□□ 0.59
SMOQ99835 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMOQ99835 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.72■□□□□ 0.59
SMOQ99835 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.72■□□□□ 0.59
SMOQ99835 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SMOQ99835 AF238378.1-201ENST00000526806 358 ntBASIC18.72■□□□□ 0.59
SMOQ99835 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.72■□□□□ 0.59
SMOQ99835 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.72■□□□□ 0.59
SMOQ99835 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 AC116407.2-201ENST00000613639 860 ntBASIC18.72■□□□□ 0.59
SMOQ99835 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SMOQ99835 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.72■□□□□ 0.59
SMOQ99835 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMOQ99835 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMOQ99835 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.71■□□□□ 0.59
SMOQ99835 AC079781.3-201ENST00000449110 356 ntBASIC18.71■□□□□ 0.59
SMOQ99835 SAPCD2P3-201ENST00000455031 850 ntBASIC18.71■□□□□ 0.59
SMOQ99835 AC122714.2-201ENST00000502787 707 ntBASIC18.71■□□□□ 0.59
SMOQ99835 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.71■□□□□ 0.59
SMOQ99835 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 AP001269.4-201ENST00000609611 512 ntBASIC18.71■□□□□ 0.59
SMOQ99835 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 AC020763.4-201ENST00000623414 4170 ntBASIC18.71■□□□□ 0.59
SMOQ99835 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.71■□□□□ 0.59
SMOQ99835 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
SMOQ99835 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMOQ99835 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
SMOQ99835 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.7■□□□□ 0.58
SMOQ99835 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.7■□□□□ 0.58
SMOQ99835 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 DDX43P3-201ENST00000441064 443 ntBASIC18.7■□□□□ 0.58
SMOQ99835 FAAHP1-202ENST00000446499 1238 ntBASIC18.7■□□□□ 0.58
SMOQ99835 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.7■□□□□ 0.58
SMOQ99835 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SMOQ99835 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 AL031008.1-201ENST00000619963 541 ntBASIC18.7■□□□□ 0.58
SMOQ99835 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMOQ99835 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.7■□□□□ 0.58
SMOQ99835 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMOQ99835 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMOQ99835 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms