Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNTNAP3BQ96NU0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AC008556.1-201ENST00000610908 2040 ntBASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AL596325.1-201ENST00000563991 1082 ntBASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 AL512408.1-201ENST00000569378 2000 ntBASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.04■□□□□ 0.32
CNTNAP3BQ96NU0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 VN2R19P-201ENST00000442399 1052 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC015911.4-201ENST00000588022 1070 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC025048.6-201ENST00000634326 1161 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AC105339.1-204ENST00000636249 355 ntBASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP3BQ96NU0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 AC099778.1-201ENST00000568593 1911 ntBASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 AL109659.2-201ENST00000606809 1674 ntBASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 COX5BP8-201ENST00000416911 349 ntBASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 HCG4B-203ENST00000450128 991 ntBASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms