Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHAMP1Q96JM3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 TSPY17P-201ENST00000450329 467 ntBASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.72■□□□□ 0.91
CHAMP1Q96JM3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 FITM1-202ENST00000559294 800 ntBASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHAMP1Q96JM3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHAMP1Q96JM3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AC060834.1-201ENST00000443027 2032 ntBASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AC009947.2-201ENST00000444014 672 ntBASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AL355075.4-201ENST00000554988 638 ntBASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 AL118508.1-201ENST00000613502 2345 ntBASIC20.7■□□□□ 0.9
CHAMP1Q96JM3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.69■□□□□ 0.9
CHAMP1Q96JM3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms