Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VPS33AQ96AX1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
VPS33AQ96AX1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VPS33AQ96AX1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 CROCCP2-202ENST00000412962 2773 ntBASIC17.2■□□□□ 0.34
VPS33AQ96AX1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 AC092338.2-201ENST00000568827 1415 ntBASIC17.2■□□□□ 0.34
VPS33AQ96AX1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VPS33AQ96AX1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 UBE2SP1-201ENST00000450587 669 ntBASIC17.19■□□□□ 0.34
VPS33AQ96AX1 DUTP2-201ENST00000519164 463 ntBASIC17.19■□□□□ 0.34
VPS33AQ96AX1 AP003071.4-201ENST00000562276 1284 ntBASIC17.19■□□□□ 0.34
VPS33AQ96AX1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS33AQ96AX1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 AL139384.1-201ENST00000612143 3047 ntBASIC17.18■□□□□ 0.34
VPS33AQ96AX1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 AC133963.1-201ENST00000504166 1679 ntBASIC17.18■□□□□ 0.34
VPS33AQ96AX1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 MIR3180-4-201ENST00000582223 153 ntBASIC17.18■□□□□ 0.34
VPS33AQ96AX1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VPS33AQ96AX1 AC124067.4-201ENST00000519691 2379 ntBASIC17.18■□□□□ 0.34
VPS33AQ96AX1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms