Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 AC023141.13-201ENST00000604991 943 ntBASIC19.08■□□□□ 0.64
HERVK_113Q902F9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HERVK_113Q902F9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AC003669.1-201ENST00000334569 611 ntBASIC19.07■□□□□ 0.64
HERVK_113Q902F9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AP002414.1-201ENST00000391405 1147 ntBASIC19.07■□□□□ 0.64
HERVK_113Q902F9 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.07■□□□□ 0.64
HERVK_113Q902F9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.07■□□□□ 0.64
HERVK_113Q902F9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.06■□□□□ 0.64
HERVK_113Q902F9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 AL121761.2-201ENST00000598007 1648 ntBASIC19.06■□□□□ 0.64
HERVK_113Q902F9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HERVK_113Q902F9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.05■□□□□ 0.64
HERVK_113Q902F9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 AC023141.5-201ENST00000458585 616 ntBASIC19.05■□□□□ 0.64
HERVK_113Q902F9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.05■□□□□ 0.64
HERVK_113Q902F9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HERVK_113Q902F9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms