Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 AL121894.2-201ENST00000602977 491 ntBASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 AL732292.2-201ENST00000609649 430 ntBASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM48Q8IWZ4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 IGHV3-47-201ENST00000425060 335 ntBASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 KRT18P31-201ENST00000506277 1292 ntBASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AC096582.2-201ENST00000510860 516 ntBASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 IFNL4P1-201ENST00000607083 540 ntBASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM48Q8IWZ4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 AC004870.1-201ENST00000315132 882 ntBASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 TSPY19P-201ENST00000418461 509 ntBASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 AL845331.1-201ENST00000424978 1190 ntBASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 TSPY18P-201ENST00000441642 509 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms