Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4RL2Q86UN3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AP000523.1-201ENST00000398242 1049 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 ECEL1P2-202ENST00000465689 757 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AC104390.1-201ENST00000555663 520 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 LINC01023-201ENST00000606054 436 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AC112497.1-201ENST00000624824 639 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AC097493.4-201ENST00000641197 219 ntBASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.25■□□□□ 0.03
RTN4RL2Q86UN3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 FAM87A-204ENST00000613235 858 ntBASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 LINC00304-203ENST00000565008 1864 ntBASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4RL2Q86UN3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTN4RL2Q86UN3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms