Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 AC008687.5-201ENST00000593746 558 ntBASIC18.27■□□□□ 0.52
CASC4Q6P4E1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASC4Q6P4E1 AC132938.6-201ENST00000623828 1655 ntBASIC18.27■□□□□ 0.52
CASC4Q6P4E1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASC4Q6P4E1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.27■□□□□ 0.51
CASC4Q6P4E1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASC4Q6P4E1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASC4Q6P4E1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASC4Q6P4E1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 KRT18P22-201ENST00000402024 1347 ntBASIC18.26■□□□□ 0.51
CASC4Q6P4E1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 AL596275.1-201ENST00000423464 877 ntBASIC18.26■□□□□ 0.51
CASC4Q6P4E1 ECEL1P3-201ENST00000427961 737 ntBASIC18.26■□□□□ 0.51
CASC4Q6P4E1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CASC4Q6P4E1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AL157888.1-201ENST00000631930 593 ntBASIC18.25■□□□□ 0.51
CASC4Q6P4E1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CASC4Q6P4E1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 AC100803.2-201ENST00000562459 1963 ntBASIC18.24■□□□□ 0.51
CASC4Q6P4E1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASC4Q6P4E1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms