Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 AC125437.2-201ENST00000625180 2167 ntBASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 AP002414.1-201ENST00000391405 1147 ntBASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 CNN2P2-201ENST00000443536 909 ntBASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 CNN2P3-201ENST00000450201 906 ntBASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 AL136317.3-201ENST00000618497 906 ntBASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCRAQ6ISU1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 MIR661-201ENST00000384842 89 ntBASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 COX5BP2-201ENST00000392354 334 ntBASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 TIMM8BP1-201ENST00000452384 211 ntBASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCRAQ6ISU1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCRAQ6ISU1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 OR8S1-201ENST00000310194 1080 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 MIR943-201ENST00000401286 94 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 MEIS3P1-201ENST00000495167 958 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms