Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT40Q6A162 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT40Q6A162 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT40Q6A162 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT40Q6A162 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.73■□□□□ 0.91
KRT40Q6A162 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT40Q6A162 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT40Q6A162 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT40Q6A162 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
KRT40Q6A162 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KRT40Q6A162 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT40Q6A162 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
KRT40Q6A162 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT40Q6A162 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KRT40Q6A162 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT40Q6A162 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT40Q6A162 RNF126P1-202ENST00000569893 925 ntBASIC20.72■□□□□ 0.91
KRT40Q6A162 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT40Q6A162 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KRT40Q6A162 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT40Q6A162 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT40Q6A162 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT40Q6A162 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT40Q6A162 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
KRT40Q6A162 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.71■□□□□ 0.91
KRT40Q6A162 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 UNC93B7-201ENST00000509439 705 ntBASIC20.71■□□□□ 0.91
KRT40Q6A162 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.71■□□□□ 0.91
KRT40Q6A162 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.71■□□□□ 0.91
KRT40Q6A162 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.71■□□□□ 0.91
KRT40Q6A162 NPAP1P7-201ENST00000613027 823 ntBASIC20.71■□□□□ 0.91
KRT40Q6A162 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT40Q6A162 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
KRT40Q6A162 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KRT40Q6A162 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT40Q6A162 AL353692.3-201ENST00000407031 1396 ntBASIC20.71■□□□□ 0.91
KRT40Q6A162 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
KRT40Q6A162 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KRT40Q6A162 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT40Q6A162 AC005332.3-201ENST00000589904 676 ntBASIC20.7■□□□□ 0.9
KRT40Q6A162 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT40Q6A162 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.7■□□□□ 0.9
KRT40Q6A162 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
KRT40Q6A162 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT40Q6A162 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT40Q6A162 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT40Q6A162 KRT8P47-201ENST00000604727 1398 ntBASIC20.7■□□□□ 0.9
KRT40Q6A162 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT40Q6A162 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT40Q6A162 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.69■□□□□ 0.9
KRT40Q6A162 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT40Q6A162 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms