Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 AC140912.1-201ENST00000577171 1054 ntBASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRPF38BQ5VTL8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 AC026150.2-201ENST00000564693 1156 ntBASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 AC084121.4-201ENST00000641598 221 ntBASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 AF228730.8-201ENST00000642140 221 ntBASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRPF38BQ5VTL8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 AL353593.2-201ENST00000602529 1483 ntBASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRPF38BQ5VTL8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 KRT18P65-201ENST00000439811 1286 ntBASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms