Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.57■□□□□ 0.88
HTRA3P83110 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HTRA3P83110 AL353593.2-201ENST00000602529 1483 ntBASIC20.56■□□□□ 0.88
HTRA3P83110 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HTRA3P83110 FAM185BP-201ENST00000443595 716 ntBASIC20.56■□□□□ 0.88
HTRA3P83110 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.56■□□□□ 0.88
HTRA3P83110 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.56■□□□□ 0.88
HTRA3P83110 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.56■□□□□ 0.88
HTRA3P83110 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.56■□□□□ 0.88
HTRA3P83110 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HTRA3P83110 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTRA3P83110 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HTRA3P83110 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.55■□□□□ 0.88
HTRA3P83110 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HTRA3P83110 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.55■□□□□ 0.88
HTRA3P83110 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.55■□□□□ 0.88
HTRA3P83110 SPCS2P4-201ENST00000436160 681 ntBASIC20.55■□□□□ 0.88
HTRA3P83110 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.55■□□□□ 0.88
HTRA3P83110 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.55■□□□□ 0.88
HTRA3P83110 AL135744.1-201ENST00000565098 629 ntBASIC20.55■□□□□ 0.88
HTRA3P83110 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.55■□□□□ 0.88
HTRA3P83110 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.55■□□□□ 0.88
HTRA3P83110 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HTRA3P83110 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.55■□□□□ 0.88
HTRA3P83110 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.55■□□□□ 0.88
HTRA3P83110 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HTRA3P83110 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.55■□□□□ 0.88
HTRA3P83110 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.55■□□□□ 0.88
HTRA3P83110 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTRA3P83110 PI4KAP1-204ENST00000612579 1703 ntBASIC20.55■□□□□ 0.88
HTRA3P83110 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HTRA3P83110 AC099778.1-201ENST00000568593 1911 ntBASIC20.55■□□□□ 0.88
HTRA3P83110 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HTRA3P83110 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HTRA3P83110 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HTRA3P83110 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.54■□□□□ 0.88
HTRA3P83110 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.54■□□□□ 0.88
HTRA3P83110 RAB43P1-201ENST00000561790 589 ntBASIC20.54■□□□□ 0.88
HTRA3P83110 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 ACTL9-202ENST00000612068 1252 ntBASIC20.54■□□□□ 0.88
HTRA3P83110 MIR6787-201ENST00000616675 61 ntBASIC20.54■□□□□ 0.88
HTRA3P83110 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.54■□□□□ 0.88
HTRA3P83110 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.54■□□□□ 0.88
HTRA3P83110 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTRA3P83110 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTRA3P83110 SPDYE7P-202ENST00000420373 878 ntBASIC20.53■□□□□ 0.88
HTRA3P83110 AC096633.1-201ENST00000422446 749 ntBASIC20.53■□□□□ 0.88
HTRA3P83110 TSSK5P-201ENST00000423978 907 ntBASIC20.53■□□□□ 0.88
HTRA3P83110 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTRA3P83110 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 AC003101.2-201ENST00000612557 442 ntBASIC20.53■□□□□ 0.88
HTRA3P83110 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.53■□□□□ 0.88
HTRA3P83110 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.53■□□□□ 0.88
HTRA3P83110 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
HTRA3P83110 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.53■□□□□ 0.88
HTRA3P83110 UXT-AS1-201ENST00000590504 1525 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms