Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
SMIM11AP58511 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SMIM11AP58511 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
SMIM11AP58511 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM11AP58511 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SMIM11AP58511 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.49■□□□□ 0.23
SMIM11AP58511 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.49■□□□□ 0.23
SMIM11AP58511 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMIM11AP58511 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 AC007663.1-201ENST00000438948 1240 ntBASIC16.49■□□□□ 0.23
SMIM11AP58511 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.49■□□□□ 0.23
SMIM11AP58511 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SMIM11AP58511 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
SMIM11AP58511 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
SMIM11AP58511 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SMIM11AP58511 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.49■□□□□ 0.23
SMIM11AP58511 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMIM11AP58511 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SMIM11AP58511 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMIM11AP58511 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM11AP58511 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SMIM11AP58511 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SMIM11AP58511 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.48■□□□□ 0.23
SMIM11AP58511 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.48■□□□□ 0.23
SMIM11AP58511 AL512604.3-201ENST00000569583 964 ntBASIC16.48■□□□□ 0.23
SMIM11AP58511 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.48■□□□□ 0.23
SMIM11AP58511 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.48■□□□□ 0.23
SMIM11AP58511 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SMIM11AP58511 AP001094.4-201ENST00000579008 2176 ntBASIC16.48■□□□□ 0.23
SMIM11AP58511 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
SMIM11AP58511 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM11AP58511 LINC00304-203ENST00000565008 1864 ntBASIC16.48■□□□□ 0.23
SMIM11AP58511 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SMIM11AP58511 AC100803.2-201ENST00000562459 1963 ntBASIC16.47■□□□□ 0.23
SMIM11AP58511 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
SMIM11AP58511 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SMIM11AP58511 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SMIM11AP58511 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMIM11AP58511 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
SMIM11AP58511 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMIM11AP58511 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SMIM11AP58511 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMIM11AP58511 AL158047.1-201ENST00000445918 881 ntBASIC16.47■□□□□ 0.23
SMIM11AP58511 RBM17P1-201ENST00000453646 1190 ntBASIC16.47■□□□□ 0.23
SMIM11AP58511 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.47■□□□□ 0.23
SMIM11AP58511 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms