Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.67■□□□□ 0.42
CDKN2DP55273 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2DP55273 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKN2DP55273 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKN2DP55273 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 AL353692.3-201ENST00000407031 1396 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDKN2DP55273 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CDKN2DP55273 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 LINC01311-201ENST00000565162 1445 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 RCN1P1-201ENST00000400413 996 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKN2DP55273 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2DP55273 AC092647.4-201ENST00000457211 535 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 AC112698.1-201ENST00000510299 916 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.66■□□□□ 0.42
CDKN2DP55273 RN7SL850P-201ENST00000579959 291 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.66■□□□□ 0.42
CDKN2DP55273 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 AC116407.2-201ENST00000613639 860 ntBASIC17.66■□□□□ 0.42
CDKN2DP55273 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
CDKN2DP55273 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDKN2DP55273 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDKN2DP55273 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDKN2DP55273 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2DP55273 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 AC063952.2-201ENST00000498792 1227 ntBASIC17.65■□□□□ 0.42
CDKN2DP55273 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2DP55273 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2DP55273 RNF126P1-202ENST00000569893 925 ntBASIC17.65■□□□□ 0.42
CDKN2DP55273 GPR32P1-201ENST00000601788 811 ntBASIC17.65■□□□□ 0.42
CDKN2DP55273 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CDKN2DP55273 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.65■□□□□ 0.42
CDKN2DP55273 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDKN2DP55273 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDKN2DP55273 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.65■□□□□ 0.42
CDKN2DP55273 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.65■□□□□ 0.42
CDKN2DP55273 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.64■□□□□ 0.42
CDKN2DP55273 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDKN2DP55273 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDKN2DP55273 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDKN2DP55273 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CDKN2DP55273 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKN2DP55273 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKN2DP55273 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKN2DP55273 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKN2DP55273 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms