Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA4P51532 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC31.72■■■□□ 2.67
SMARCA4P51532 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA4P51532 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCA4P51532 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC31.72■■■□□ 2.67
SMARCA4P51532 CXCL1P1-201ENST00000502804 216 ntBASIC31.71■■■□□ 2.67
SMARCA4P51532 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
SMARCA4P51532 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCA4P51532 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.71■■■□□ 2.67
SMARCA4P51532 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCA4P51532 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 ADM-207ENST00000530439 1839 ntTSL 2 BASIC31.71■■■□□ 2.67
SMARCA4P51532 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCA4P51532 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SMARCA4P51532 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC31.71■■■□□ 2.67
SMARCA4P51532 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 DDT-204ENST00000404092 805 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCA4P51532 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC31.71■■■□□ 2.67
SMARCA4P51532 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCA4P51532 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC31.71■■■□□ 2.67
SMARCA4P51532 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCA4P51532 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC31.7■■■□□ 2.67
SMARCA4P51532 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA4P51532 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCA4P51532 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC31.7■■■□□ 2.67
SMARCA4P51532 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC31.7■■■□□ 2.67
SMARCA4P51532 LINC00982-205ENST00000420957 435 ntBASIC31.7■■■□□ 2.66
SMARCA4P51532 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC31.7■■■□□ 2.66
SMARCA4P51532 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC31.7■■■□□ 2.66
SMARCA4P51532 AL121761.2-201ENST00000598007 1648 ntBASIC31.7■■■□□ 2.66
SMARCA4P51532 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
SMARCA4P51532 HARS-201ENST00000307633 1780 ntTSL 2 BASIC31.7■■■□□ 2.66
SMARCA4P51532 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SMARCA4P51532 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA4P51532 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA4P51532 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA4P51532 AC126763.1-201ENST00000552015 2118 ntBASIC31.69■■■□□ 2.66
SMARCA4P51532 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
SMARCA4P51532 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC31.69■■■□□ 2.66
SMARCA4P51532 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA4P51532 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC31.69■■■□□ 2.66
SMARCA4P51532 AC138761.1-201ENST00000584393 385 ntBASIC31.69■■■□□ 2.66
SMARCA4P51532 ACTL9-202ENST00000612068 1252 ntBASIC31.69■■■□□ 2.66
SMARCA4P51532 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 AC100803.2-201ENST00000562459 1963 ntBASIC31.69■■■□□ 2.66
SMARCA4P51532 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SMARCA4P51532 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC31.69■■■□□ 2.66
SMARCA4P51532 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC31.68■■■□□ 2.66
SMARCA4P51532 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SMARCA4P51532 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SMARCA4P51532 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
SMARCA4P51532 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 INO80C-206ENST00000586489 594 ntTSL 3 BASIC31.68■■■□□ 2.66
SMARCA4P51532 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCA4P51532 LINC00628-201ENST00000628516 1289 ntBASIC31.68■■■□□ 2.66
SMARCA4P51532 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCA4P51532 AL590787.1-201ENST00000568856 1315 ntBASIC31.68■■■□□ 2.66
SMARCA4P51532 AL031598.1-201ENST00000561511 1773 ntBASIC31.68■■■□□ 2.66
SMARCA4P51532 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC31.68■■■□□ 2.66
SMARCA4P51532 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC31.68■■■□□ 2.66
SMARCA4P51532 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
SMARCA4P51532 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA4P51532 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC31.67■■■□□ 2.66
SMARCA4P51532 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
SMARCA4P51532 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC31.67■■■□□ 2.66
SMARCA4P51532 AQP6-203ENST00000551733 849 ntTSL 3 BASIC31.67■■■□□ 2.66
SMARCA4P51532 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC31.67■■■□□ 2.66
SMARCA4P51532 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC31.67■■■□□ 2.66
SMARCA4P51532 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC31.67■■■□□ 2.66
SMARCA4P51532 TK1-204ENST00000590430 683 ntTSL 3 BASIC31.67■■■□□ 2.66
SMARCA4P51532 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC31.67■■■□□ 2.66
SMARCA4P51532 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC31.67■■■□□ 2.66
SMARCA4P51532 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 NEK7-201ENST00000367383 586 ntTSL 2 BASIC31.67■■■□□ 2.66
SMARCA4P51532 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA4P51532 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms