Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC073130.3-201ENST00000624389 2278 ntBASIC20.03■□□□□ 0.8
CENPFP49454 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CENPFP49454 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CENPFP49454 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.02■□□□□ 0.8
CENPFP49454 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CENPFP49454 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CENPFP49454 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.02■□□□□ 0.8
CENPFP49454 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CENPFP49454 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CENPFP49454 OR8S1-201ENST00000310194 1080 ntBASIC20.02■□□□□ 0.8
CENPFP49454 CRYGEP-201ENST00000412192 528 ntBASIC20.02■□□□□ 0.8
CENPFP49454 KRT18P65-201ENST00000439811 1286 ntBASIC20.02■□□□□ 0.8
CENPFP49454 RNA5SP421-201ENST00000516864 134 ntBASIC20.02■□□□□ 0.8
CENPFP49454 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CENPFP49454 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CENPFP49454 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CENPFP49454 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CENPFP49454 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.02■□□□□ 0.79
CENPFP49454 AP002414.1-201ENST00000391405 1147 ntBASIC20.02■□□□□ 0.79
CENPFP49454 ACTG1P14-201ENST00000446382 1122 ntBASIC20.02■□□□□ 0.79
CENPFP49454 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.02■□□□□ 0.79
CENPFP49454 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.02■□□□□ 0.79
CENPFP49454 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.02■□□□□ 0.79
CENPFP49454 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CENPFP49454 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 AC025580.3-201ENST00000617932 1424 ntBASIC20.01■□□□□ 0.79
CENPFP49454 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.01■□□□□ 0.79
CENPFP49454 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.01■□□□□ 0.79
CENPFP49454 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 KRT8P47-201ENST00000604727 1398 ntBASIC20.01■□□□□ 0.79
CENPFP49454 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CENPFP49454 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 AC073592.5-201ENST00000624854 528 ntBASIC20.01■□□□□ 0.79
CENPFP49454 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CENPFP49454 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPFP49454 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20■□□□□ 0.79
CENPFP49454 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20■□□□□ 0.79
CENPFP49454 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20■□□□□ 0.79
CENPFP49454 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CENPFP49454 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CENPFP49454 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CENPFP49454 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CENPFP49454 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CENPFP49454 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20■□□□□ 0.79
CENPFP49454 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CENPFP49454 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CENPFP49454 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPFP49454 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20■□□□□ 0.79
CENPFP49454 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.99■□□□□ 0.79
CENPFP49454 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 PGM5P2-202ENST00000637225 1043 ntBASIC19.99■□□□□ 0.79
CENPFP49454 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPFP49454 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPFP49454 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPFP49454 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPFP49454 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPFP49454 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms