Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 MIR149-201ENST00000384879 89 ntBASIC14.15□□□□□ -0.14
CDC34P49427 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 AC026185.1-201ENST00000445748 174 ntBASIC14.15□□□□□ -0.14
CDC34P49427 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC34P49427 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC34P49427 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC34P49427 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC34P49427 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDC34P49427 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC34P49427 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
CDC34P49427 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CDC34P49427 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC34P49427 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDC34P49427 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 C8orf49-201ENST00000525043 1968 ntBASIC14.14□□□□□ -0.15
CDC34P49427 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDC34P49427 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.14□□□□□ -0.15
CDC34P49427 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 AC091390.4-202ENST00000476426 537 ntBASIC14.14□□□□□ -0.15
CDC34P49427 UNC93B4-201ENST00000505679 747 ntBASIC14.14□□□□□ -0.15
CDC34P49427 AC083906.2-201ENST00000511578 360 ntBASIC14.14□□□□□ -0.15
CDC34P49427 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.14□□□□□ -0.15
CDC34P49427 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CDC34P49427 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 AC046158.3-201ENST00000624947 2558 ntBASIC14.14□□□□□ -0.15
CDC34P49427 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDC34P49427 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDC34P49427 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC34P49427 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.14□□□□□ -0.15
CDC34P49427 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDC34P49427 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC34P49427 CDCA4P2-201ENST00000441182 718 ntBASIC14.13□□□□□ -0.15
CDC34P49427 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC34P49427 MCCD1P1-208ENST00000445732 328 ntBASIC14.13□□□□□ -0.15
CDC34P49427 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.13□□□□□ -0.15
CDC34P49427 CKBP1-201ENST00000565489 1086 ntBASIC14.13□□□□□ -0.15
CDC34P49427 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CDC34P49427 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms