Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXA10P31260 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.7■■□□□ 1.06
HOXA10P31260 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 KRT19P2-202ENST00000557173 1012 ntBASIC21.7■■□□□ 1.06
HOXA10P31260 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXA10P31260 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXA10P31260 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXA10P31260 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.7■■□□□ 1.06
HOXA10P31260 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
HOXA10P31260 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 CROCCP3-202ENST00000420820 1947 ntBASIC21.7■■□□□ 1.06
HOXA10P31260 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXA10P31260 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.7■■□□□ 1.06
HOXA10P31260 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HOXA10P31260 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.69■■□□□ 1.06
HOXA10P31260 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.69■■□□□ 1.06
HOXA10P31260 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.69■■□□□ 1.06
HOXA10P31260 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.69■■□□□ 1.06
HOXA10P31260 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 AC027612.4-201ENST00000605371 583 ntBASIC21.69■■□□□ 1.06
HOXA10P31260 GGTLC5P-201ENST00000617623 998 ntBASIC21.69■■□□□ 1.06
HOXA10P31260 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXA10P31260 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HOXA10P31260 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXA10P31260 AL096828.2-201ENST00000567259 1965 ntBASIC21.68■■□□□ 1.06
HOXA10P31260 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXA10P31260 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXA10P31260 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXA10P31260 STK19B-204ENST00000512515 211 ntBASIC21.68■■□□□ 1.06
HOXA10P31260 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.68■■□□□ 1.06
HOXA10P31260 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
HOXA10P31260 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXA10P31260 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
HOXA10P31260 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.68■■□□□ 1.06
HOXA10P31260 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 AC009336.1-201ENST00000608941 1553 ntBASIC21.68■■□□□ 1.06
HOXA10P31260 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.68■■□□□ 1.06
HOXA10P31260 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXA10P31260 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HOXA10P31260 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXA10P31260 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXA10P31260 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXA10P31260 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXA10P31260 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXA10P31260 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXA10P31260 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXA10P31260 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.67■■□□□ 1.06
HOXA10P31260 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXA10P31260 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXA10P31260 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXA10P31260 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXA10P31260 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.67■■□□□ 1.06
HOXA10P31260 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXA10P31260 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXA10P31260 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HOXA10P31260 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXA10P31260 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms