Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.23■□□□□ 0.35
CAPN3P20807 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CAPN3P20807 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CAPN3P20807 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 AC011676.5-201ENST00000624864 2660 ntBASIC17.23■□□□□ 0.35
CAPN3P20807 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN3P20807 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.23■□□□□ 0.35
CAPN3P20807 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CAPN3P20807 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN3P20807 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN3P20807 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CAPN3P20807 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN3P20807 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CAPN3P20807 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CAPN3P20807 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.22■□□□□ 0.35
CAPN3P20807 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN3P20807 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.22■□□□□ 0.35
CAPN3P20807 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.22■□□□□ 0.35
CAPN3P20807 BX664615.1-201ENST00000443558 458 ntBASIC17.22■□□□□ 0.35
CAPN3P20807 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CAPN3P20807 AP003041.3-201ENST00000527151 707 ntBASIC17.22■□□□□ 0.35
CAPN3P20807 AL023803.3-201ENST00000615559 522 ntBASIC17.22■□□□□ 0.35
CAPN3P20807 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CAPN3P20807 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.22■□□□□ 0.35
CAPN3P20807 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.22■□□□□ 0.35
CAPN3P20807 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CAPN3P20807 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 AL390955.1-201ENST00000428694 934 ntBASIC17.21■□□□□ 0.35
CAPN3P20807 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CAPN3P20807 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.21■□□□□ 0.35
CAPN3P20807 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN3P20807 KRT18P56-201ENST00000507275 550 ntBASIC17.21■□□□□ 0.35
CAPN3P20807 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
CAPN3P20807 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.21■□□□□ 0.35
CAPN3P20807 AC104390.1-201ENST00000555663 520 ntBASIC17.21■□□□□ 0.35
CAPN3P20807 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN3P20807 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CAPN3P20807 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms