Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SCG2P13521 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 AC097374.2-201ENST00000618617 1306 ntBASIC20.56■□□□□ 0.88
SCG2P13521 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCG2P13521 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 DDX43P3-201ENST00000441064 443 ntBASIC20.56■□□□□ 0.88
SCG2P13521 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.56■□□□□ 0.88
SCG2P13521 AP000867.3-201ENST00000524675 377 ntBASIC20.56■□□□□ 0.88
SCG2P13521 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SCG2P13521 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.56■□□□□ 0.88
SCG2P13521 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SCG2P13521 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.56■□□□□ 0.88
SCG2P13521 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG2P13521 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCG2P13521 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.56■□□□□ 0.88
SCG2P13521 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG2P13521 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SCG2P13521 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
SCG2P13521 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCG2P13521 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCG2P13521 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCG2P13521 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.55■□□□□ 0.88
SCG2P13521 IGHV3-47-201ENST00000425060 335 ntBASIC20.55■□□□□ 0.88
SCG2P13521 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCG2P13521 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG2P13521 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
SCG2P13521 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCG2P13521 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.54■□□□□ 0.88
SCG2P13521 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.54■□□□□ 0.88
SCG2P13521 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SCG2P13521 NSUN5P1-202ENST00000421140 1535 ntBASIC20.54■□□□□ 0.88
SCG2P13521 NSUN5P2-203ENST00000457352 1529 ntBASIC20.54■□□□□ 0.88
SCG2P13521 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.54■□□□□ 0.88
SCG2P13521 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.54■□□□□ 0.88
SCG2P13521 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.54■□□□□ 0.88
SCG2P13521 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG2P13521 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.54■□□□□ 0.88
SCG2P13521 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SCG2P13521 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.54■□□□□ 0.88
SCG2P13521 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms