Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CYP2D8P-201ENST00000433633 1490 ntBASIC16.73■□□□□ 0.27
OPN1SWP03999 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 AC022211.2-201ENST00000585075 2527 ntBASIC16.73■□□□□ 0.27
OPN1SWP03999 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 TSPY14P-201ENST00000303979 915 ntBASIC16.73■□□□□ 0.27
OPN1SWP03999 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.73■□□□□ 0.27
OPN1SWP03999 DUTP2-201ENST00000519164 463 ntBASIC16.73■□□□□ 0.27
OPN1SWP03999 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.73■□□□□ 0.27
OPN1SWP03999 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.73■□□□□ 0.27
OPN1SWP03999 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.73■□□□□ 0.27
OPN1SWP03999 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
OPN1SWP03999 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.72■□□□□ 0.27
OPN1SWP03999 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
OPN1SWP03999 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
OPN1SWP03999 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
OPN1SWP03999 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 TSPY15P-201ENST00000457163 923 ntBASIC16.72■□□□□ 0.27
OPN1SWP03999 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.72■□□□□ 0.27
OPN1SWP03999 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.72■□□□□ 0.27
OPN1SWP03999 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.72■□□□□ 0.27
OPN1SWP03999 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
OPN1SWP03999 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
OPN1SWP03999 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
OPN1SWP03999 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
OPN1SWP03999 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
OPN1SWP03999 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
OPN1SWP03999 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
OPN1SWP03999 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.71■□□□□ 0.27
OPN1SWP03999 EGLN1P1-201ENST00000531623 762 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms