Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PDGFBP01127 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 AC067863.1-201ENST00000494933 530 ntBASIC17.86■□□□□ 0.45
PDGFBP01127 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 AP005018.1-201ENST00000525475 301 ntBASIC17.86■□□□□ 0.45
PDGFBP01127 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFBP01127 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 AC015911.4-201ENST00000588022 1070 ntBASIC17.86■□□□□ 0.45
PDGFBP01127 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PDGFBP01127 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 AC006116.8-202ENST00000587620 1550 ntBASIC17.86■□□□□ 0.45
PDGFBP01127 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFBP01127 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.86■□□□□ 0.45
PDGFBP01127 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFBP01127 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 AC003669.1-201ENST00000334569 611 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.85■□□□□ 0.45
PDGFBP01127 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.85■□□□□ 0.45
PDGFBP01127 AL627223.1-201ENST00000416693 442 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PDGFBP01127 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.85■□□□□ 0.45
PDGFBP01127 TIMM8BP1-201ENST00000452384 211 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDGFBP01127 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PDGFBP01127 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.85■□□□□ 0.45
PDGFBP01127 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 AL353593.2-201ENST00000602529 1483 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 AC009093.7-201ENST00000623853 1223 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 AL032819.2-201ENST00000624543 2162 ntBASIC17.85■□□□□ 0.45
PDGFBP01127 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.85■□□□□ 0.45
PDGFBP01127 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDGFBP01127 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDGFBP01127 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFBP01127 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 AL049812.1-201ENST00000432563 2267 ntBASIC17.84■□□□□ 0.45
PDGFBP01127 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.84■□□□□ 0.45
PDGFBP01127 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFBP01127 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PDGFBP01127 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.84■□□□□ 0.45
PDGFBP01127 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFBP01127 BASP1P1-201ENST00000430708 665 ntBASIC17.84■□□□□ 0.45
PDGFBP01127 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDGFBP01127 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDGFBP01127 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.84■□□□□ 0.45
PDGFBP01127 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.84■□□□□ 0.45
PDGFBP01127 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.84■□□□□ 0.45
PDGFBP01127 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms