Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXN3O00409 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 AL390719.2-201ENST00000606993 987 ntBASIC19.15■□□□□ 0.66
FOXN3O00409 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXN3O00409 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXN3O00409 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 REXO1L11P-201ENST00000620964 1927 ntBASIC19.15■□□□□ 0.66
FOXN3O00409 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN3O00409 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXN3O00409 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXN3O00409 Z83836.1-201ENST00000624605 1642 ntBASIC19.14■□□□□ 0.66
FOXN3O00409 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FOXN3O00409 AL645608.8-201ENST00000606034 2086 ntBASIC19.14■□□□□ 0.65
FOXN3O00409 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN3O00409 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXN3O00409 AL671277.2-201ENST00000458060 996 ntBASIC19.14■□□□□ 0.65
FOXN3O00409 KRT18P21-201ENST00000515767 1272 ntBASIC19.14■□□□□ 0.65
FOXN3O00409 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
FOXN3O00409 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.14■□□□□ 0.65
FOXN3O00409 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
FOXN3O00409 AC116407.2-201ENST00000613639 860 ntBASIC19.14■□□□□ 0.65
FOXN3O00409 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXN3O00409 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FOXN3O00409 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FOXN3O00409 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 HTR7P1-202ENST00000624664 4411 ntBASIC19.13■□□□□ 0.65
FOXN3O00409 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN3O00409 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.13■□□□□ 0.65
FOXN3O00409 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 MTCL1P1-201ENST00000446207 792 ntBASIC19.13■□□□□ 0.65
FOXN3O00409 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.13■□□□□ 0.65
FOXN3O00409 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXN3O00409 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 AC133963.1-201ENST00000504166 1679 ntBASIC19.13■□□□□ 0.65
FOXN3O00409 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN3O00409 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 AC141586.5-201ENST00000624546 2050 ntBASIC19.13■□□□□ 0.65
FOXN3O00409 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXN3O00409 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXN3O00409 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FOXN3O00409 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FOXN3O00409 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXN3O00409 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXN3O00409 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXN3O00409 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
FOXN3O00409 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms