Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MIR3687-2-201ENST00000577708 61 ntBASIC17.53■□□□□ 0.4
TAF4O00268 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
TAF4O00268 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 MIR3687-1-201ENST00000614492 61 ntBASIC17.53■□□□□ 0.4
TAF4O00268 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
TAF4O00268 AP001271.2-201ENST00000624018 1556 ntBASIC17.53■□□□□ 0.4
TAF4O00268 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.53■□□□□ 0.4
TAF4O00268 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TAF4O00268 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TAF4O00268 AC068880.1-201ENST00000507289 2297 ntBASIC17.52■□□□□ 0.4
TAF4O00268 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TAF4O00268 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.52■□□□□ 0.4
TAF4O00268 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.52■□□□□ 0.4
TAF4O00268 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.52■□□□□ 0.4
TAF4O00268 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.52■□□□□ 0.4
TAF4O00268 FAM8A3P-201ENST00000427218 844 ntBASIC17.52■□□□□ 0.4
TAF4O00268 MCCD1P1-208ENST00000445732 328 ntBASIC17.52■□□□□ 0.4
TAF4O00268 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.52■□□□□ 0.4
TAF4O00268 DNAJB3-202ENST00000449667 1266 ntBASIC17.52■□□□□ 0.4
TAF4O00268 AC132008.2-207ENST00000454517 770 ntBASIC17.52■□□□□ 0.4
TAF4O00268 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.52■□□□□ 0.4
TAF4O00268 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.52■□□□□ 0.4
TAF4O00268 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TAF4O00268 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TAF4O00268 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TAF4O00268 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.52■□□□□ 0.4
TAF4O00268 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TAF4O00268 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.52■□□□□ 0.39
TAF4O00268 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
TAF4O00268 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.52■□□□□ 0.39
TAF4O00268 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TAF4O00268 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TAF4O00268 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TAF4O00268 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TAF4O00268 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 BICD1-207ENST00000551848 1962 ntBASIC17.51■□□□□ 0.39
TAF4O00268 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 AL354751.1-201ENST00000412768 1863 ntBASIC17.51■□□□□ 0.39
TAF4O00268 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.51■□□□□ 0.39
TAF4O00268 VENTXP7-201ENST00000475503 772 ntBASIC17.51■□□□□ 0.39
TAF4O00268 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.51■□□□□ 0.39
TAF4O00268 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.51■□□□□ 0.39
TAF4O00268 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.51■□□□□ 0.39
TAF4O00268 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TAF4O00268 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms