Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USH1CQ9Y6N9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 AC133963.1-201ENST00000504166 1679 ntBASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 AC099343.3-201ENST00000605834 2503 ntBASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 AC093010.1-201ENST00000473625 1624 ntBASIC17.87■□□□□ 0.45
USH1CQ9Y6N9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 AC008622.2-201ENST00000617006 1229 ntBASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USH1CQ9Y6N9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AC008040.2-201ENST00000461049 708 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 RPS2P4-201ENST00000476944 856 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AP003097.1-201ENST00000530657 1135 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AC034236.2-201ENST00000606662 1610 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AC011298.2-201ENST00000617989 482 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 AL109923.1-201ENST00000618799 583 ntBASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
USH1CQ9Y6N9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms