Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.71■■□□□ 1.07
ARFGEF1Q9Y6D6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
ARFGEF1Q9Y6D6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 AC023141.13-201ENST00000604991 943 ntBASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 AC007952.6-201ENST00000573168 2673 ntBASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 AC003957.1-201ENST00000625108 2673 ntBASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ARFGEF1Q9Y6D6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AC051619.7-201ENST00000568314 623 ntBASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 GGTLC5P-201ENST00000617623 998 ntBASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AC132938.5-201ENST00000624980 1813 ntBASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.69■■□□□ 1.06
ARFGEF1Q9Y6D6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 KRT18P32-201ENST00000424695 1287 ntBASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 AC074386.1-202ENST00000463561 864 ntBASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 AC025580.3-201ENST00000617932 1424 ntBASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.68■■□□□ 1.06
ARFGEF1Q9Y6D6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARFGEF1Q9Y6D6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 FAM207CP-201ENST00000443486 507 ntBASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 RN7SL204P-201ENST00000582831 262 ntBASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms