Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC114341.1-201ENST00000618070 349 ntBASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NOTCH3Q9UM47 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
NOTCH3Q9UM47 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
NOTCH3Q9UM47 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NOTCH3Q9UM47 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NOTCH3Q9UM47 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.83□□□□□ -0.19
NOTCH3Q9UM47 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 AL355385.1-201ENST00000606123 409 ntBASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 IGHV3-41-201ENST00000613121 348 ntBASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 AL163051.1-201ENST00000569214 1512 ntBASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NOTCH3Q9UM47 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 NUS1P2-201ENST00000417358 873 ntBASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 AC005332.7-201ENST00000614046 2005 ntBASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 AC140113.2-201ENST00000604370 208 ntBASIC13.82□□□□□ -0.2
NOTCH3Q9UM47 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms