Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 TP53TG3HP-202ENST00000569755 579 ntBASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 IGHV3-72-202ENST00000621503 303 ntBASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 AL033527.4-201ENST00000641026 673 ntBASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRFN3Q9BTN0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 FAM86MP-201ENST00000340703 885 ntBASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 AC092506.1-202ENST00000401022 528 ntBASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 BCYRN1-201ENST00000418539 200 ntBASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 AC026150.2-201ENST00000564693 1156 ntBASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRFN3Q9BTN0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 ELK2AP-201ENST00000392510 1007 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC092933.1-201ENST00000393644 945 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC103564.2-201ENST00000432853 1299 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC092552.1-201ENST00000547243 906 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC099522.2-201ENST00000607001 744 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC099343.3-201ENST00000605834 2503 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC020907.5-201ENST00000624372 1936 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 AC148477.5-201ENST00000625164 1645 ntBASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRFN3Q9BTN0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 AC112492.5-201ENST00000421897 457 ntBASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 SPTLC1P1-201ENST00000447199 261 ntBASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 AC243562.1-201ENST00000560672 389 ntBASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 REXO1L6P-201ENST00000603433 1515 ntBASIC17.71■□□□□ 0.43
LRFN3Q9BTN0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms