Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.05■□□□□ 0.16
SPENQ96T58 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.05■□□□□ 0.16
SPENQ96T58 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.04■□□□□ 0.16
SPENQ96T58 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.04■□□□□ 0.16
SPENQ96T58 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 MTCL1P1-201ENST00000446207 792 ntBASIC16.04■□□□□ 0.16
SPENQ96T58 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SPENQ96T58 AC005498.2-205ENST00000593218 784 ntBASIC16.04■□□□□ 0.16
SPENQ96T58 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SPENQ96T58 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SPENQ96T58 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.04■□□□□ 0.16
SPENQ96T58 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 AL096865.1-201ENST00000606796 927 ntBASIC16.04■□□□□ 0.16
SPENQ96T58 AC010507.1-201ENST00000633895 436 ntBASIC16.04■□□□□ 0.16
SPENQ96T58 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
SPENQ96T58 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.04■□□□□ 0.16
SPENQ96T58 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 UGT1A2P-201ENST00000454886 866 ntBASIC16.04■□□□□ 0.16
SPENQ96T58 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.04■□□□□ 0.16
SPENQ96T58 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.04■□□□□ 0.16
SPENQ96T58 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.04■□□□□ 0.16
SPENQ96T58 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPENQ96T58 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPENQ96T58 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPENQ96T58 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPENQ96T58 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.03■□□□□ 0.16
SPENQ96T58 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.03■□□□□ 0.16
SPENQ96T58 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.03■□□□□ 0.16
SPENQ96T58 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.03■□□□□ 0.16
SPENQ96T58 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SPENQ96T58 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPENQ96T58 KRT18P65-201ENST00000439811 1286 ntBASIC16.03■□□□□ 0.16
SPENQ96T58 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.03■□□□□ 0.16
SPENQ96T58 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.03■□□□□ 0.16
SPENQ96T58 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SPENQ96T58 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.02■□□□□ 0.16
SPENQ96T58 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.02■□□□□ 0.16
SPENQ96T58 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SPENQ96T58 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.02■□□□□ 0.16
SPENQ96T58 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.02■□□□□ 0.16
SPENQ96T58 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.02■□□□□ 0.16
SPENQ96T58 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 AL096828.2-201ENST00000567259 1965 ntBASIC16.02■□□□□ 0.16
SPENQ96T58 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SPENQ96T58 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.02■□□□□ 0.16
SPENQ96T58 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPENQ96T58 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.02■□□□□ 0.16
SPENQ96T58 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPENQ96T58 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPENQ96T58 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPENQ96T58 MKNK2P1-201ENST00000437526 628 ntBASIC16.02■□□□□ 0.15
SPENQ96T58 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.02■□□□□ 0.15
SPENQ96T58 AC005829.1-201ENST00000570002 483 ntBASIC16.02■□□□□ 0.15
SPENQ96T58 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.02■□□□□ 0.15
SPENQ96T58 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPENQ96T58 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPENQ96T58 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms