Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 AL121672.3-201ENST00000608644 468 ntBASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 TSPY22P-201ENST00000427496 604 ntBASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 AC005332.3-201ENST00000589904 676 ntBASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.96■□□□□ 0.95
SMARCC2Q8TAQ2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SMARCC2Q8TAQ2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.95■□□□□ 0.95
SMARCC2Q8TAQ2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 KRT8P26-201ENST00000534154 1276 ntBASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 Z83836.1-201ENST00000624605 1642 ntBASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMARCC2Q8TAQ2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC020763.4-201ENST00000623414 4170 ntBASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TSSC2-201ENST00000450217 709 ntBASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms