Protein–RNA interactions for Protein: Q8N6K7

SAMD3, Sterile alpha motif domain-containing protein 3, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3Q8N6K7 AL022326.1-202ENST00000641533 845 ntBASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SAMD3Q8N6K7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 AC002558.1-201ENST00000488906 803 ntBASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 AC148477.8-201ENST00000624298 468 ntBASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 AC073592.5-201ENST00000624854 528 ntBASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 FAM215A-202ENST00000632077 792 ntBASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 AC138028.4-201ENST00000564984 1845 ntBASIC20.16■□□□□ 0.82
SAMD3Q8N6K7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC005104.2-201ENST00000427818 678 ntBASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 MTDHP4-201ENST00000600287 670 ntBASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC019129.2-201ENST00000609837 1235 ntBASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 BICD1-207ENST00000551848 1962 ntBASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC100803.2-201ENST00000562459 1963 ntBASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SAMD3Q8N6K7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.82
SAMD3Q8N6K7 AP000997.3-201ENST00000623333 2250 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AC003669.1-201ENST00000334569 611 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 MYCLP1-201ENST00000372451 1075 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AL020989.1-201ENST00000422979 469 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 OR7E14P-202ENST00000530490 1290 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AC139887.3-201ENST00000568585 713 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AC025062.2-201ENST00000605477 670 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 AC107918.4-202ENST00000641623 219 ntBASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SAMD3Q8N6K7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms