Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 KRT89P-201ENST00000620027 1478 ntBASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPNE9Q8IYJ1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 KRT18P48-201ENST00000434763 852 ntBASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 AC112907.2-201ENST00000448639 330 ntBASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CPNE9Q8IYJ1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 HBZP1-201ENST00000354915 429 ntBASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 AC006116.8-202ENST00000587620 1550 ntBASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPNE9Q8IYJ1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE9Q8IYJ1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms