Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 AL020996.1-203ENST00000536896 2307 ntBASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC60Q8IWA6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC60Q8IWA6 BICD1-207ENST00000551848 1962 ntBASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AC018712.1-201ENST00000455767 687 ntBASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AC122714.2-201ENST00000502787 707 ntBASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 SART3-203ENST00000546611 1184 ntBASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 AP000867.4-201ENST00000641616 219 ntBASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC60Q8IWA6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 AC009949.1-201ENST00000623048 1830 ntBASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 AP000347.1-202ENST00000435868 847 ntBASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC60Q8IWA6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms