Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP4Q6PIL6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP4Q6PIL6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP4Q6PIL6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP4Q6PIL6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 AC026271.2-201ENST00000428091 497 ntBASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP4Q6PIL6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MIR935-201ENST00000401179 91 ntBASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 RARRES2P4-201ENST00000514074 484 ntBASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 RCC2P6-201ENST00000526625 1557 ntBASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP4Q6PIL6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.9□□□□□ -0.19
KCNIP4Q6PIL6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
KCNIP4Q6PIL6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
KCNIP4Q6PIL6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP4Q6PIL6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms