Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX4Q33E94 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX4Q33E94 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX4Q33E94 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX4Q33E94 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX4Q33E94 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX4Q33E94 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 GPAT2P1-201ENST00000444924 1672 ntBASIC16.68■□□□□ 0.26
RFX4Q33E94 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX4Q33E94 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX4Q33E94 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RFX4Q33E94 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFX4Q33E94 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX4Q33E94 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 AL163051.1-201ENST00000569214 1512 ntBASIC16.67■□□□□ 0.26
RFX4Q33E94 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RFX4Q33E94 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RFX4Q33E94 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.67■□□□□ 0.26
RFX4Q33E94 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.67■□□□□ 0.26
RFX4Q33E94 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.67■□□□□ 0.26
RFX4Q33E94 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFX4Q33E94 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.67■□□□□ 0.26
RFX4Q33E94 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 CD177P1-201ENST00000606252 935 ntBASIC16.67■□□□□ 0.26
RFX4Q33E94 DGCR10-201ENST00000609839 495 ntBASIC16.67■□□□□ 0.26
RFX4Q33E94 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.67■□□□□ 0.26
RFX4Q33E94 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.67■□□□□ 0.26
RFX4Q33E94 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RFX4Q33E94 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
RFX4Q33E94 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX4Q33E94 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX4Q33E94 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.66■□□□□ 0.26
RFX4Q33E94 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.66■□□□□ 0.26
RFX4Q33E94 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.66■□□□□ 0.26
RFX4Q33E94 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RFX4Q33E94 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.66■□□□□ 0.26
RFX4Q33E94 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.66■□□□□ 0.26
RFX4Q33E94 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.66■□□□□ 0.26
RFX4Q33E94 AC116562.2-201ENST00000507042 360 ntBASIC16.66■□□□□ 0.26
RFX4Q33E94 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.66■□□□□ 0.26
RFX4Q33E94 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
RFX4Q33E94 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.66■□□□□ 0.26
RFX4Q33E94 SLC25A1P4-201ENST00000567977 778 ntBASIC16.66■□□□□ 0.26
RFX4Q33E94 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX4Q33E94 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms