Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBP50607 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBP50607 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBP50607 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBP50607 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBP50607 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBP50607 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 NOC2LP2-201ENST00000407594 1944 ntBASIC18.84■□□□□ 0.61
TUBP50607 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBP50607 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBP50607 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 FAAHP1-202ENST00000446499 1238 ntBASIC18.84■□□□□ 0.61
TUBP50607 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.84■□□□□ 0.61
TUBP50607 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.84■□□□□ 0.61
TUBP50607 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.84■□□□□ 0.61
TUBP50607 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBP50607 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 RN7SL510P-201ENST00000581311 263 ntBASIC18.84■□□□□ 0.61
TUBP50607 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBP50607 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TUBP50607 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBP50607 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.83■□□□□ 0.61
TUBP50607 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TUBP50607 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBP50607 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TUBP50607 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TUBP50607 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TUBP50607 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBP50607 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.83■□□□□ 0.61
TUBP50607 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
TUBP50607 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBP50607 POM121L3P-201ENST00000419331 1163 ntBASIC18.83■□□□□ 0.6
TUBP50607 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBP50607 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBP50607 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 LINC01711-201ENST00000598340 967 ntBASIC18.83■□□□□ 0.6
TUBP50607 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 AL121894.2-201ENST00000602977 491 ntBASIC18.83■□□□□ 0.6
TUBP50607 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 IFNL4P1-201ENST00000607083 540 ntBASIC18.83■□□□□ 0.6
TUBP50607 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBP50607 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.6
TUBP50607 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBP50607 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBP50607 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBP50607 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TUBP50607 HCG11-201ENST00000411553 5696 ntBASIC18.82■□□□□ 0.6
TUBP50607 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 AC004870.1-201ENST00000315132 882 ntBASIC18.82■□□□□ 0.6
TUBP50607 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBP50607 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 MTCL1P1-201ENST00000446207 792 ntBASIC18.82■□□□□ 0.6
TUBP50607 MINOS1P3-201ENST00000457048 203 ntBASIC18.82■□□□□ 0.6
TUBP50607 UNC93B7-201ENST00000509439 705 ntBASIC18.82■□□□□ 0.6
TUBP50607 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBP50607 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBP50607 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBP50607 AC138894.3-201ENST00000603787 634 ntBASIC18.82■□□□□ 0.6
TUBP50607 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.82■□□□□ 0.6
TUBP50607 AL732292.2-201ENST00000609649 430 ntBASIC18.82■□□□□ 0.6
TUBP50607 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TUBP50607 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms