Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC1A1P43005 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.76■□□□□ 0.59
SLC1A1P43005 AC079602.3-201ENST00000623931 403 ntBASIC18.76■□□□□ 0.59
SLC1A1P43005 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC1A1P43005 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC1A1P43005 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A1P43005 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC1A1P43005 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC1A1P43005 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A1P43005 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC1A1P43005 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC1A1P43005 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC1A1P43005 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC1A1P43005 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC1A1P43005 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC1A1P43005 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SLC1A1P43005 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC1A1P43005 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SLC1A1P43005 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A1P43005 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC1A1P43005 AC009949.1-201ENST00000623048 1830 ntBASIC18.74■□□□□ 0.59
SLC1A1P43005 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A1P43005 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC1A1P43005 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC1A1P43005 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
SLC1A1P43005 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
SLC1A1P43005 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.74■□□□□ 0.59
SLC1A1P43005 HLA-F-220ENST00000434407 884 ntBASIC18.74■□□□□ 0.59
SLC1A1P43005 ATP5G1P1-201ENST00000448724 379 ntBASIC18.74■□□□□ 0.59
SLC1A1P43005 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A1P43005 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC1A1P43005 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC1A1P43005 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A1P43005 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A1P43005 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC1A1P43005 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.73■□□□□ 0.59
SLC1A1P43005 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A1P43005 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A1P43005 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 KRT18P48-201ENST00000434763 852 ntBASIC18.73■□□□□ 0.59
SLC1A1P43005 AC010203.1-204ENST00000548782 407 ntBASIC18.73■□□□□ 0.59
SLC1A1P43005 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A1P43005 AL441883.1-201ENST00000566170 1045 ntBASIC18.73■□□□□ 0.59
SLC1A1P43005 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC1A1P43005 AC009154.2-201ENST00000621177 724 ntBASIC18.73■□□□□ 0.59
SLC1A1P43005 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC1A1P43005 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SLC1A1P43005 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC1A1P43005 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC1A1P43005 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC1A1P43005 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SLC1A1P43005 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 PRORSD1P-202ENST00000563365 2154 ntBASIC18.72■□□□□ 0.59
SLC1A1P43005 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC1A1P43005 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC1A1P43005 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC1A1P43005 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms