Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.76■□□□□ 0.75
TPM1P09493 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TPM1P09493 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TPM1P09493 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TPM1P09493 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM1P09493 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM1P09493 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
TPM1P09493 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 PP12613-201ENST00000424958 2230 ntBASIC19.75■□□□□ 0.75
TPM1P09493 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM1P09493 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
TPM1P09493 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TPM1P09493 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TPM1P09493 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TPM1P09493 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.75■□□□□ 0.75
TPM1P09493 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.75■□□□□ 0.75
TPM1P09493 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM1P09493 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM1P09493 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.75■□□□□ 0.75
TPM1P09493 CD177P1-201ENST00000606252 935 ntBASIC19.75■□□□□ 0.75
TPM1P09493 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM1P09493 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM1P09493 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM1P09493 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TPM1P09493 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 ID1-201ENST00000376105 1233 ntBASIC19.74■□□□□ 0.75
TPM1P09493 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM1P09493 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM1P09493 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM1P09493 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPM1P09493 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM1P09493 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 LINC01126-201ENST00000623515 1646 ntBASIC19.73■□□□□ 0.75
TPM1P09493 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TPM1P09493 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM1P09493 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM1P09493 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms