Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD4P01730 AC211486.1-202ENST00000416371 468 ntBASIC19.72■□□□□ 0.75
CD4P01730 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.72■□□□□ 0.75
CD4P01730 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.72■□□□□ 0.75
CD4P01730 PRYP5-201ENST00000451909 266 ntBASIC19.72■□□□□ 0.75
CD4P01730 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.72■□□□□ 0.75
CD4P01730 AC211476.1-201ENST00000503899 468 ntBASIC19.72■□□□□ 0.75
CD4P01730 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.72■□□□□ 0.75
CD4P01730 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.72■□□□□ 0.75
CD4P01730 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.72■□□□□ 0.75
CD4P01730 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.72■□□□□ 0.75
CD4P01730 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.72■□□□□ 0.75
CD4P01730 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.72■□□□□ 0.75
CD4P01730 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD4P01730 PGM5P2-202ENST00000637225 1043 ntBASIC19.72■□□□□ 0.75
CD4P01730 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.72■□□□□ 0.75
CD4P01730 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.72■□□□□ 0.75
CD4P01730 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CD4P01730 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.71■□□□□ 0.75
CD4P01730 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.71■□□□□ 0.75
CD4P01730 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 MCCD1P2-201ENST00000423228 335 ntBASIC19.71■□□□□ 0.75
CD4P01730 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.71■□□□□ 0.75
CD4P01730 KRT18P2-201ENST00000447938 1258 ntBASIC19.71■□□□□ 0.75
CD4P01730 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.71■□□□□ 0.75
CD4P01730 AC006557.2-201ENST00000592985 1240 ntBASIC19.71■□□□□ 0.75
CD4P01730 MIR1199-201ENST00000621445 119 ntBASIC19.71■□□□□ 0.75
CD4P01730 AC005593.1-201ENST00000624894 515 ntBASIC19.71■□□□□ 0.75
CD4P01730 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CD4P01730 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CD4P01730 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
CD4P01730 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.71■□□□□ 0.75
CD4P01730 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CD4P01730 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 YBX1P5-201ENST00000509441 847 ntBASIC19.7■□□□□ 0.74
CD4P01730 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.7■□□□□ 0.74
CD4P01730 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.7■□□□□ 0.74
CD4P01730 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.7■□□□□ 0.74
CD4P01730 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CD4P01730 AD001527.2-201ENST00000622994 785 ntBASIC19.7■□□□□ 0.74
CD4P01730 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CD4P01730 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
CD4P01730 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CD4P01730 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.69■□□□□ 0.74
CD4P01730 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CD4P01730 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.69■□□□□ 0.74
CD4P01730 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CD4P01730 AC108751.1-201ENST00000490852 363 ntBASIC19.69■□□□□ 0.74
CD4P01730 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.69■□□□□ 0.74
CD4P01730 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CD4P01730 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.69■□□□□ 0.74
CD4P01730 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms