Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 AC132938.6-201ENST00000623828 1655 ntBASIC17.9■□□□□ 0.46
PDGFBP01127 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDGFBP01127 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.9■□□□□ 0.46
PDGFBP01127 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.89■□□□□ 0.46
PDGFBP01127 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.89■□□□□ 0.46
PDGFBP01127 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PDGFBP01127 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PDGFBP01127 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 PTCHD3P3-201ENST00000403073 906 ntBASIC17.89■□□□□ 0.45
PDGFBP01127 HLA-V-201ENST00000429037 534 ntBASIC17.89■□□□□ 0.45
PDGFBP01127 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.89■□□□□ 0.45
PDGFBP01127 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.89■□□□□ 0.45
PDGFBP01127 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.89■□□□□ 0.45
PDGFBP01127 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.89■□□□□ 0.45
PDGFBP01127 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFBP01127 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFBP01127 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFBP01127 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 AC092919.2-201ENST00000623631 1645 ntBASIC17.88■□□□□ 0.45
PDGFBP01127 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 TFAMP1-201ENST00000412727 736 ntBASIC17.88■□□□□ 0.45
PDGFBP01127 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFBP01127 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
PDGFBP01127 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFBP01127 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 AC007064.4-201ENST00000637740 555 ntBASIC17.88■□□□□ 0.45
PDGFBP01127 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
PDGFBP01127 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFBP01127 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFBP01127 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFBP01127 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDGFBP01127 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PDGFBP01127 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFBP01127 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFBP01127 AC055876.3-201ENST00000431496 288 ntBASIC17.87■□□□□ 0.45
PDGFBP01127 AC103564.2-201ENST00000432853 1299 ntBASIC17.87■□□□□ 0.45
PDGFBP01127 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFBP01127 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFBP01127 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFBP01127 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.87■□□□□ 0.45
PDGFBP01127 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFBP01127 AC068137.2-201ENST00000605408 478 ntBASIC17.87■□□□□ 0.45
PDGFBP01127 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFBP01127 AC138649.4-201ENST00000612222 287 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms