Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTP4A3O75365 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTP4A3O75365 REXO1L11P-201ENST00000620964 1927 ntBASIC16.15■□□□□ 0.18
PTP4A3O75365 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTP4A3O75365 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 HLA-J-201ENST00000462773 1622 ntBASIC16.15■□□□□ 0.18
PTP4A3O75365 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PTP4A3O75365 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTP4A3O75365 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 AC046158.3-201ENST00000624947 2558 ntBASIC16.15■□□□□ 0.18
PTP4A3O75365 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTP4A3O75365 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
PTP4A3O75365 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.14■□□□□ 0.17
PTP4A3O75365 KRT18P65-201ENST00000439811 1286 ntBASIC16.14■□□□□ 0.17
PTP4A3O75365 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.14■□□□□ 0.17
PTP4A3O75365 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.14■□□□□ 0.17
PTP4A3O75365 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 AC009949.1-201ENST00000623048 1830 ntBASIC16.14■□□□□ 0.17
PTP4A3O75365 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PTP4A3O75365 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTP4A3O75365 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.14■□□□□ 0.17
PTP4A3O75365 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PTP4A3O75365 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 AL596275.1-201ENST00000423464 877 ntBASIC16.13■□□□□ 0.17
PTP4A3O75365 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 AC034232.1-201ENST00000506026 1064 ntBASIC16.13■□□□□ 0.17
PTP4A3O75365 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PTP4A3O75365 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 AC079602.3-201ENST00000623931 403 ntBASIC16.13■□□□□ 0.17
PTP4A3O75365 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PTP4A3O75365 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.13■□□□□ 0.17
PTP4A3O75365 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 AP001094.4-201ENST00000579008 2176 ntBASIC16.13■□□□□ 0.17
PTP4A3O75365 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.13■□□□□ 0.17
PTP4A3O75365 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PTP4A3O75365 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.12■□□□□ 0.17
PTP4A3O75365 AL391807.1-203ENST00000604392 2365 ntBASIC16.12■□□□□ 0.17
PTP4A3O75365 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.12■□□□□ 0.17
PTP4A3O75365 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PTP4A3O75365 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms