Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.01■□□□□ 0.31
SCN2BO60939 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.01■□□□□ 0.31
SCN2BO60939 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SCN2BO60939 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
SCN2BO60939 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SCN2BO60939 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
SCN2BO60939 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SCN2BO60939 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17■□□□□ 0.31
SCN2BO60939 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCN2BO60939 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCN2BO60939 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17■□□□□ 0.31
SCN2BO60939 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 AC093827.2-201ENST00000512654 315 ntBASIC17■□□□□ 0.31
SCN2BO60939 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17■□□□□ 0.31
SCN2BO60939 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 AC008687.5-201ENST00000593746 558 ntBASIC17■□□□□ 0.31
SCN2BO60939 AL138966.2-201ENST00000621997 464 ntBASIC17■□□□□ 0.31
SCN2BO60939 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 FZD10-202ENST00000539839 3282 ntBASIC17■□□□□ 0.31
SCN2BO60939 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SCN2BO60939 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN2BO60939 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17■□□□□ 0.31
SCN2BO60939 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SCN2BO60939 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN2BO60939 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN2BO60939 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN2BO60939 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN2BO60939 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN2BO60939 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCN2BO60939 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN2BO60939 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.99■□□□□ 0.31
SCN2BO60939 AC113404.2-201ENST00000507884 177 ntBASIC16.99■□□□□ 0.31
SCN2BO60939 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN2BO60939 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCN2BO60939 AC133963.1-201ENST00000504166 1679 ntBASIC16.99■□□□□ 0.31
SCN2BO60939 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SCN2BO60939 LINC00602-201ENST00000629776 2065 ntBASIC16.99■□□□□ 0.31
SCN2BO60939 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN2BO60939 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN2BO60939 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SCN2BO60939 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN2BO60939 AC022898.2-201ENST00000616822 1312 ntBASIC16.98■□□□□ 0.31
SCN2BO60939 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms