Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPEO14579 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPEO14579 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COPEO14579 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
COPEO14579 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 AC132938.6-201ENST00000623828 1655 ntBASIC17.93■□□□□ 0.46
COPEO14579 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.93■□□□□ 0.46
COPEO14579 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COPEO14579 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.93■□□□□ 0.46
COPEO14579 AC104390.1-201ENST00000555663 520 ntBASIC17.93■□□□□ 0.46
COPEO14579 WWOX-216ENST00000569818 525 ntBASIC17.93■□□□□ 0.46
COPEO14579 MIR3180-4-201ENST00000582223 153 ntBASIC17.93■□□□□ 0.46
COPEO14579 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
COPEO14579 AL359736.2-201ENST00000621992 437 ntBASIC17.93■□□□□ 0.46
COPEO14579 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
COPEO14579 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COPEO14579 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COPEO14579 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.92■□□□□ 0.46
COPEO14579 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.92■□□□□ 0.46
COPEO14579 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.92■□□□□ 0.46
COPEO14579 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.92■□□□□ 0.46
COPEO14579 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.92■□□□□ 0.46
COPEO14579 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.92■□□□□ 0.46
COPEO14579 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 AC112497.1-201ENST00000624824 639 ntBASIC17.92■□□□□ 0.46
COPEO14579 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
COPEO14579 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COPEO14579 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
COPEO14579 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COPEO14579 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.91■□□□□ 0.46
COPEO14579 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
COPEO14579 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
COPEO14579 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.91■□□□□ 0.46
COPEO14579 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.91■□□□□ 0.46
COPEO14579 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.91■□□□□ 0.46
COPEO14579 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.91■□□□□ 0.46
COPEO14579 AP003041.3-201ENST00000527151 707 ntBASIC17.91■□□□□ 0.46
COPEO14579 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.91■□□□□ 0.46
COPEO14579 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.91■□□□□ 0.46
COPEO14579 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
COPEO14579 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COPEO14579 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.91■□□□□ 0.46
COPEO14579 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.91■□□□□ 0.46
COPEO14579 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 AC022898.2-201ENST00000616822 1312 ntBASIC17.91■□□□□ 0.46
COPEO14579 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms