Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.11■□□□□ 0.33
RTCAO00442 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
RTCAO00442 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.11■□□□□ 0.33
RTCAO00442 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.11■□□□□ 0.33
RTCAO00442 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 AC087388.1-201ENST00000571370 1112 ntBASIC17.11■□□□□ 0.33
RTCAO00442 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.11■□□□□ 0.33
RTCAO00442 AL590326.2-201ENST00000625139 305 ntBASIC17.11■□□□□ 0.33
RTCAO00442 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
RTCAO00442 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTCAO00442 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTCAO00442 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.11■□□□□ 0.33
RTCAO00442 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RTCAO00442 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RTCAO00442 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RTCAO00442 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 KRT18P65-201ENST00000439811 1286 ntBASIC17.1■□□□□ 0.33
RTCAO00442 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.1■□□□□ 0.33
RTCAO00442 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
RTCAO00442 AL136038.3-201ENST00000561909 1096 ntBASIC17.1■□□□□ 0.33
RTCAO00442 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RTCAO00442 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.1■□□□□ 0.33
RTCAO00442 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
RTCAO00442 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTCAO00442 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
RTCAO00442 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 SLC25A6P5-201ENST00000435663 894 ntBASIC17.09■□□□□ 0.33
RTCAO00442 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.09■□□□□ 0.33
RTCAO00442 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.09■□□□□ 0.33
RTCAO00442 AL121956.5-201ENST00000625261 221 ntBASIC17.09■□□□□ 0.33
RTCAO00442 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 AC005332.1-201ENST00000577698 1310 ntBASIC17.09■□□□□ 0.33
RTCAO00442 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTCAO00442 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
RTCAO00442 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RTCAO00442 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
RTCAO00442 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RTCAO00442 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.08■□□□□ 0.33
RTCAO00442 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.08■□□□□ 0.33
RTCAO00442 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RTCAO00442 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RTCAO00442 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.08■□□□□ 0.33
RTCAO00442 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.08■□□□□ 0.33
RTCAO00442 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RTCAO00442 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
RTCAO00442 AC022898.2-201ENST00000616822 1312 ntBASIC17.08■□□□□ 0.32
RTCAO00442 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RTCAO00442 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTCAO00442 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.08■□□□□ 0.32
RTCAO00442 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.08■□□□□ 0.32
RTCAO00442 KRT18P35-201ENST00000510488 1269 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms