Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPA3F8WFD2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 KRT16P4-201ENST00000453883 522 ntBASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 AC009078.2-202ENST00000463353 338 ntBASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 AC113404.2-201ENST00000507884 177 ntBASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPA3F8WFD2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AL024508.2-201ENST00000607749 1894 ntBASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AL160237.2-201ENST00000556165 472 ntBASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPA3F8WFD2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPA3F8WFD2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms