Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AC006011.2-201ENST00000621313 1158 ntBASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 AC009102.3-201ENST00000623118 1491 ntBASIC16.22■□□□□ 0.19
TMEM129A0AVI4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM129A0AVI4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AL355312.1-201ENST00000407115 2176 ntBASIC16.21■□□□□ 0.19
TMEM129A0AVI4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 MIR149-201ENST00000384879 89 ntBASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 BX664615.1-201ENST00000443558 458 ntBASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AL049597.2-201ENST00000565575 961 ntBASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AC008622.2-201ENST00000617006 1229 ntBASIC16.21■□□□□ 0.19
TMEM129A0AVI4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM129A0AVI4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.21■□□□□ 0.18
TMEM129A0AVI4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM129A0AVI4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM129A0AVI4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.21■□□□□ 0.18
TMEM129A0AVI4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 DUX4L26-201ENST00000489078 1255 ntBASIC16.2■□□□□ 0.18
TMEM129A0AVI4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 AC133963.1-201ENST00000504166 1679 ntBASIC16.2■□□□□ 0.18
TMEM129A0AVI4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM129A0AVI4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms