Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 RPS2P1-201ENST00000434010 821 ntBASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 ABCD1P5-201ENST00000445663 754 ntBASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 AL499627.1-201ENST00000569373 2188 ntBASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 AC005082.1-201ENST00000413042 2259 ntBASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX11Q9Y5W9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 LETM1P2-201ENST00000597330 2178 ntBASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 LINC01126-201ENST00000623515 1646 ntBASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX11Q9Y5W9 AC104109.2-201ENST00000602919 1418 ntBASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 IGHV3-22-201ENST00000520721 359 ntBASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNX11Q9Y5W9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms